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  1. NIF
  2. NIF-11873 DISCO: import PANTHER data
  3. NIF-11918

DISCO: import PANTHER orthology calls

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    • Sub-task
    • Resolution: Completed
    • Major
    • None
    • None
    • [DEPRECATED] Data Ingest
    • None
    • NIF

    Description

      We should pull in the ortholog calls from panther.

      ftp://ftp.pantherdb.org/ortholog/8.1/RefGeneomeOrthologs.tar.gz
      (Note that these files are updated only every 6 months, and I've also asked for a generic link "current_release")

      Since the file is huge, i figure we should initially limit the species that are included, just like we did for string db.

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          is related to

          New Feature Request - A new feature of the product, which has yet to be developed. NIF-11724 view on PANTHER data

          • Major - Major loss of function.
          • Closed

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              hoffmasc Scott Hoffmann
              nlw Nicole Washington
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                Updated:
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