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    • NIF
    • Issues closed as MONARCH has transitioned from UCSD services

    Description

      Pull the Mouse phenotype data from OMIM and HPO tables to generate gene-to-disease, disease-to-phenotype for precompute pipelines. This should be placed into:
      https://phenotype-ontologies.googlecode.com/svn/trunk/data/Homo_sapiens

      Presently has:
      Hs-disease-labels.txt
      Hs-disease-to-phenotype-C.txt
      Hs-disease-to-phenotype-I.txt
      Hs-disease-to-phenotype-O.txt
      Hs-gene-labels.txt
      Hs-gene-to-disease.txt

      Generated by SQL queries (see attached).

      These ought to be replaced to REST calls to nif_0000_03216_9 and nlx_151835_1.

      I think eventually we may have a unified disease-to-gene mapping table when we have more resources mapping genes to diseases, but that isn't available yet.

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            kshefchek Kent Shefchek
            nlw Nicole Washington
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