DISCO: import interpro data

DISCO id: nif-0000-03035

http://www.ebi.ac.uk/interpro/biomart/martview/

here's the xml to import from their biomart:

<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE Query>
<Query virtualSchemaName = "default" formatter = "TSV" header = "0" uniqueRows = "0" count = "" datasetConfigVersion = "0.6" >

<Dataset name = "entry" interface = "default" >
<Attribute name = "entry_id" />
<Attribute name = "entry_name" />
<Attribute name = "entry_type" />
<Attribute name = "protein_ac" />
<Attribute name = "protein_name" />
<Attribute name = "taxonomy_full_name" />
<Attribute name = "protein_database_name" />
<Attribute name = "protein_tax_id" />
<Attribute name = "method_id" />
<Attribute name = "method_name" />
<Attribute name = "method_database_name" />
<Attribute name = "found_in_entry_name" />
<Attribute name = "go_id" />
<Attribute name = "go_term_name" />
<Attribute name = "contained_entry_name" />
<Attribute name = "found_in_entry_id" />
<Attribute name = "contained_entry_id" />
<Attribute name = "abstract" />
<Attribute name = "entry_short_name" />
</Dataset>
</Query>

I've also found these things that might be useful:

mappings between interpro and GO
ftp://ftp.ebi.ac.uk/pub/databases/interpro/interpro2go

the hierarchy of the interpro domains... this might be useful as a pseudo-ontology in ontoquest.
ftp://ftp.ebi.ac.uk/pub/databases/interpro/ParentChildTreeFile.txt