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  1. NIF
  2. NIF-11770

DISCO: import orthologies from ENSEMBL

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    • New Feature Request
    • Resolution: Responded
    • Major
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    • NIF

    Description

      We should import the homology/paralogy from ensembl for whatever pair-wise organisms we ingest.

      Here's a description of their method:
      http://uswest.ensembl.org/info/docs/compara/homology_method.html

      I think this data is available via their API, so we'll have to use that and write a script to pull it in.

      Initial species to include are: Human, Mouse, Fish, Fly, Worm (our core). Then Rat. Then, expand to the species that are in OMIA.

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            bandrow Anita Bandrowski (use this one!)
            nlw Nicole Washington
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