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  1. NIF
  2. NIF-11680

Searching via labels vs IDs

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    • NIF
    • Issues closed as MONARCH has transitioned from UCSD services

    Description

      Search via ID returns 28 results:

      https://neuinfo.org/mynif/search.php?q=%22CL:0000746%22&t=data&b=0&r=20&cf=Images

      However, search for the equivalent label returns only 3:

      https://neuinfo.org/mynif/search.php?q=%22cardiac%20muscle%20cell%22&t=data&b=0&r=20&cf=Images

      I presume this is because CL is not used in OntoQuest? Here is the CL term in obo format:

      id: CL:0000746
      name: cardiac muscle cell
      namespace: cell
      alt_id: FMA:83808
      def: "Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. In mammals, the contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei." [GOC:mtg_cardiacconduct_nov11, GOC:tfm, ISBN:0323052908]
      synonym: "cardiac muscle fiber" EXACT [GO:0048739]
      synonym: "cardiac myocyte" EXACT []
      synonym: "cardiocyte" BROAD []
      synonym: "cardiomyocyte" EXACT []
      synonym: "heart muscle cell" EXACT []

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            agupta Amarnath Gupta (use this)
            cmungall Chris Mungall
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